The only tool you need is androguard - The swiss army knife. It combines all old tools into a single command line interface.
You can still use the other tools as well, but note that they might get removed some day.
- androguard - The swiss army knife
- androguard analyze - Androguard Shell
- androguard cg - Create Call Graph from APK
- androguard gui - Androguard GUI
- androguard sign - Print Certificate Fingerprints
- androguard axml - AndroidManifest.xml parser
- androguard arsc - resources.arsc parser
- androguard decompile - Decompile APKs and create CFG
- androguard dissassemble - Disassembler for DEX